Journal: bioRxiv
Article Title: PDK1 and YAP1/TEAD signaling drive acquired KRAS inhibitor resistance in KRAS-mutant non-small cell lung cancer
doi: 10.64898/2025.12.22.696060
Figure Lengend Snippet: PDK1 expression is necessary and sufficient for generating resistance to KRAS G12D inhibition. (A) Growth inhibition assays of 344SQ-G12D cells treated with MRTX1133 (blue line) or co-treated with BX795 at its IC50 concentration (red line). IC50 values for MRTX1133 are indicated on the graph. (B) Growth inhibition assays of 344SQ-G12D MRTX1133-resistant line (M1133Res) treated with MRTX1133 (blue line) or co-treated with BX795 at its IC50 concentration (red line). (C) Western blot analysis of phosphorylated and total PDK1, S6, and RSK2 in 344SQ-G12D and M1133Res cells upon BX795 treatment at IC50 concentrations (3uM and 8uM, respectively). Actin was used as a loading control. (D) Colony formation assays of 344SQ-G12D and M1133Res cells upon treatment with vehicle, MRTX1133, BX795, or both. (E) Graph showing quantification of the data in D. *, p<0.05. **, p<0.01. (F) Western blot of 344SQ-G12D, M1133Res (parental control), and two PDK1 knockout clones (PDK1 KO-1 and -2) of M1133Res cells to evaluate phosphorylated and total PDK1, S6, and RSK2 levels. (G) Growth inhibition assays of M1133Res (blue), PDK1 KO-1 (red) and PDK1 KO-2 (grey) cells upon treatment with MRTX1133. (H) Colony formation assays of 344SQ-G12D, M1133Res, and PDK1 KO-1 and KO-2 cells when treated with vehicle or MRTX1133 at the IC30 concentration of the parental control line for 72 hrs. (I) Quantification of the colony formation assay in H. **, p<0.01. (J) Western blot of 344SQ-G12D cells transduced to stably express PDK1 (344SQ-PDK1) under a doxycycline-inducible promoter. The cells were treated with dox for the indicated time points before collection. The blots were probed for phosphorylated and total PDK1, S6, and RSK2 levels. (K) Growth inhibition assays of 344SQ-PDK1 cells with (blue line) or without (red line) 48 hours of dox pretreatment. The IC50 of MRTX1133 for each cell line is indicated on the graph. (L) Colony formation assays of 344SQ-PDK1 cells with or without 24 hours of dox treatment. The cells were treated with either DMSO or MRTX1133 at the IC30 concentration of 344SQ-PDK1 +dox cells. The colonies were then allowed to grow out for 3 days in drug-free complete media after which they were stained. (M) Quantification of the data in L. *, p<0.05, **, p<0.01.
Article Snippet: BX795 (Selleck Chemicals), VT107 and GSK2334470 (MedChemExpress) were dissolved in a PEG-based solvent according to the manufacturer’s instructions.
Techniques: Expressing, Inhibition, Concentration Assay, Western Blot, Control, Knock-Out, Clone Assay, Colony Assay, Stable Transfection, Staining